Bioinformatics and Experimental Resources
Bioinformatics Links
- Bioinformatics.ca - Home of the Canadian Bioinformatics Workshops and bioinformatics resources in Canada
- Galaxy Community Hub - An open source bioinformatics platform. A whole universe of bioinformatics tools
- KnowPulse - Bioinformatics and data management for pulse genomics
- Digital Research Alliance of Canada - Links to information about RDA clusters such as Cedar, Beluga, and Graham
https://bioinformatics.ca Contains many bioinformatics links and the Canadian Bioinformatics Workshops homepage https://galaxyproject.org Link to Galaxy, an open source bioinformatics platform. A whole universe of bioinformatics tools https://knowpulse.usask.ca Bioinformatics and data for pulse genomics Computing infrastructure links
https://alliancecan.ca/en Homepage for the Research Digital Alliance https://alliancecan.ca/en/services/advanced-research-computing/federation/national-host-sites Links to information about RDA clusters such as Cedar, Beluga and Graham
https://www.ncbi.nlm.nih.gov The National Center for Biotechnology Information. Access to a truly immense amount of data. Don’t get data poisoning! https://blast.ncbi.nlm.nih.gov/Blast.cgi BLAST. What more is there to say? https://pubmed.ncbi.nlm.nih.gov Pubmed to find references and links to papers https://www.faang.org Functional annotation of animal genomics https://phytozome-next.jgi.doe.gov Database with 274 assembled and annotated plant genomes
Bioinformatics rich institutes
https://www.cshl.edu Cold Spring Harbor. Lots of molecular biology information Salk Institute
Should add some more Canadian sites
Sequencing labs
- OPAL - Omics and Precision Agriculture Lab at the Global Institute for Food Security - Genomics, phenomics, computational informatics and more
- McGill Genome Centre - McGill Applied Genomics Core (MAGIC) – Next generation sequencing, functional genomics & epigenomics, high throughput genotyping, validation studies and more
- UBC – University of British Columbia Sequencing and Bioinformatics Consortium – State of the art facilities, training, and expert support for projects involving sequencing
- NRC Saskatoon – DNA sequencing, genotyping, and bioinformatics
- Novel Biologics – Whole bacterial genome sequencing, sequencing library preparation, gene and gene fragment synthesis, and more
NGS companies
Illumina https://www.illumina.com/
Oxford Nanopore https://nanoporetech.com/
PacBio https://www.pacb.com/
Partner links
Red River College
University of Manitoba
Universite de St Boniface
Cytophage
PSI
